Publications

Jeroen B. Smaers, Alejandro Gil Gómez, Rosalind E. M. Rickaby, Christopher W. Pugh, C. West, P. Aggarwal, A. Hecker, A. Chen, C. Wen, Markus Riessland, Joshua S Rest (2026). Oxygen-sensing regulatory architecture structures mammalian diversification. bioRxiv (preprint).
Preprint DOI PDF
Alejandro Gil Gómez, Ben Leyland, Anbarasu Karthikaichamy, Rebecca C. Adikes, David Q. Matus, Joshua S Rest, Jackie L. Collier (2025). Proteome remodeling in the zoospore-to-vegetative cell transition of the stramenopile Aurantiochytrium limacinum reveals candidate ectoplasmic network proteins. PLOS ONE.
DOI Dataset
Alejandro Gil Gómez (2025). Molecular Evolution and Systems-Level Consequences of Natural Antibiotic Biosynthesis in Bacteria. PhD Dissertation, State University of New York at Stony Brook.
Alejandro Gil Gómez, Joshua S Rest (2025). Phylogenetic reconciliation of BGCs unveils an acceleration in evolutionary and HGT rates after the evolution of aminocoumarin antibiotics. Manuscript.
Alejandro Gil Gómez, Joshua S Rest (2024). Wiring between close nodes in molecular networks evolves more quickly than between distant nodes. Molecular Biology and Evolution.
DOI Code Dataset PDF
Maria Reguera, Carlos Manuel Conesa, Alejandro Gil Gómez (2018). The impact of different agroecological conditions on the nutritional composition of quinoa seeds. PeerJ-Life and Environment.
DOI Code Dataset PDF